There is a box with unlimited number of balls of $C$ different colours. Balls of the same colour are indistinguishable. We are picking balls at random with equal probability for each colour. What is the probability of picking $N$ balls out of the box such that there are $K$ balls of specific different colours?
My idea is as follows:
Select $K$ of $N$ bins - there are $\binom{N}{K}$ ways to do that. Next, we need to place $K$ balls in those places - there are $K!$ ways to do that. After these steps, there are $N - K$ places left empty, and we fill them with balls of any colour - $C^{N - K}$ ways. To obtain the probability we need to divide by total number of sequences - $C^N$. Finally, we have this formula: $\frac{\binom{N}{K} \times K! \times C^{N - K}}{C^N}$.
This formula seems to be wrong. An example: assume $N = 4$, $C = 4$, $K = 3$. I have programmatically calculated that there are 60 such sequences. So, the probability of getting such a sequence is $\frac{60}{4^4} = \frac{15}{64}$. According to the formula, this should be equal to $\frac{\binom{4}{3} \times 3! \times 4^{4 - 3}}{4^4} = \frac{24}{64}$, which is wrong.
There are actually two counting errors in your attempt.
Consider your example, $N = 4$, $C = 4$, $K = 3$. Let the four colors be $\{b,g,r,y\}$ and the three selected colors be $\{b,g,r\}.$ Select $3$ of $4$ bins: $1,2,3.$ Place three balls of the selected colors in those bins: $1\to b,\ 2\to g,\ 3\to r.$ Place a ball of any color in the remaining bin (bin number $4$); suppose we pick the color $b.$ So we have the following colors of balls in the four bins: $$1\to b,\ 2\to g,\ 3\to r,\ 4\to b.$$
Now select a different subset of $3$ of the $4$ bins: $2,3,4.$ Place three balls of the selected colors in those bins: $2\to g,\ 3\to r,\ 4\to b.$ Place a ball of any color in the remaining bin (bin number $1$); suppose we pick the color $b.$ Then we have the following colors of balls in the four bins: $$1\to b,\ 2\to g,\ 3\to r,\ 4\to b.$$
Notice that it's the exact same sequence of colors each time. But we generated the sequences in two different ways, and your verbal description counts them as two sequences.
On the other hand, you count $(N-K)^C$ ways to fill $N-K$ spaces with balls of $C$ different possible colors. The correct number of possibilities for that action is $C^{N-K},$ which comes out to $4$ rather than $1$ in your example. That is, applying your verbal description of the count accurately, you would compute the probability $\frac{96}{4^4} = \frac{24}{4^4}.$
In summary, you start with a method that overcounts, but then you apply a formula incorrectly and thereby undercount one of the steps of your method by a factor of $4,$ and you end up with too low a probability in the end.
To do the actual probability, you might start by calculating the probability that a particular color is missing from the $N$ random balls, then find the probability that at least one of your $K$ selected colors is missing. But then (I think) you would have to do an inclusion-exclusion process to avoid excluding the various combinations of two colors, three colors, etc., too many times or too few times.