I'm working with knots in the PL category.
In "Surface Knots in 4-space" of Seiichi Kamada, the author states on p. 26 that the linking number of two oriented knots $K$ and $J$ in $S^3$ is the algebraic intersection number of one of the knots, say $K$ and a Seifert surface $F$ of the other one ($J$) after assuming that $K$ and $F$ "intersect transversely in some points". The signs of the intersection points are defined via pictures that show the two different cases of orientations of $K$ and $F$. Since Kamada doesn't use tangent spaces for the definition and since he claimed to consider only PL knots, I assume "transversal intersection" doesn't mean $\forall p \in K \cap F: T_pK+T_pF = T_p S^3$ in this case.
So what is the definition of a "transversal intersection of PL submanifolds (of $S^3$)?
I think you may be mistaken --- transversal intersection (or "transverse" intersection, since transversal is a noun...) really does mean that the two tangent spaces span $T_p S^3$. But in the case of a PL knot, you should probably assume that all intersections are in the interior of edges, not at vertices (easy by general position, assuming finitely many vertices). For PL Seifert surfaces, the same thing: intersections only in the interior of faces. Once you have those two conditions, you just need to look at the line containing the knot-edge, and the plane containing the seifert-surface-face, and make sure that they span all of 3-space.
(or, if you like, to not be transverse, you need only show that the line lies within the plane of the seifert-surface-face; that doesn't require a definition of "span" for subspaces rather than vectors...)