I think the notation $$ \int_C P \, dx + Q \, dy $$ is a bit confusing. I understand fairly well the notation $\int_C \vec{F}\cdot d\vec{r}$ and I understand from my question here that they are the same.
My follow up questions are
What is the motivation behind using the notation $\int_C P \, dx + Q \, dy$ instead of $\int_C \vec{F} \cdot d\vec{r}$? That is, what is the motivation behind the notation $$ \int_C P \, dx + Q \, dy \text{ ?} $$ Again, the reason I ask is because I think it looks confusing.
In a comment to my other question, it was stated that it is best to avoid this notation, is there a reason for this?
I am mostly interested in the answers to the first question, but I welcome all.
However there is another way we can evaluate this integral: we can multiply out the dot product and obtain the integral of the differential (1-)form $$\int_C \vec F \cdot d\vec r = \int_C Pdx+Qdy \tag{2}$$ Both $(1)$ and $(2)$ are perfectly valid integrals -- but they are different types of integrals.
It is not.
Thus to avoid mistakes such as this (there are other possible mistakes that come to mind if you try treating differential forms the same as Riemann integrals) I recommend that until and unless you learn about differential forms, if you ever see an integral of the form $\int_C Pdx + Qdy$, that you parametrize the curve and then convert it into an integral of the form $\int_a^b \left[\vec F(\vec v(t))\cdot \vec v'(t)\right]dt$. This is just a Riemann integral and you are hopefully aware of what it means intuitively and how to evaluate it.
Though some professors (especially physics professors) will claim that the way to manipulate integrals of the form $\int_C Pdx+Qdy$ is obvious, without a bit of formal knowledge of differential forms my recommendation is that you just avoid them.
If you're interested in differential forms -- as I said they are very useful -- then I recommend first taking a look at this short pdf to get the basic idea. Then if you'd like to learn more there are several good books on the subject. One that I found particularly nice is Harold Edwards' Advanced Calculus: A Differential Forms Approach.