Consider the (non-oriented, so we do not care about the center of each side) rubiks cube group, $G$, which is a subgroup of $S_{48}$ and is generated by the letters: $\{F,B,U,D,L,R\}$, i.e. I mean that $G = \langle F,B,U,D,R,L\rangle$ (subject to the canonical relations for the non-oriented $3\times 3$ rubiks cube). I am trying to just manually verify if the superflip is in the center (just by verifying if it commutes with each of the generators) using https://rubikscu.be/#cubesolver , but this is exceptionally cumbersome and time consuming. Let $h\in G$ denote the superflip. I have seen other websites, MSE pages, and pdfs describe the center as simply only containing $1_G$ and $h$, but these pages very rarely distinguish if they mean the oriented cube (the subgroup of $S_{54}$) or non-oriented, I am not really sure if it matters either (but furthermore, I am really sure how one would rigorously prove this in any case, the arguments I can find are mostly fairly ambiguous).
2026-03-28 11:53:00.1774698780
Non-oriented Rubiks Cube Group
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As aschepler mentioned in the comments, it's irrelevant how the superflip is realized in terms of the generators. Since the Rubik's Cube group is formally just a subgroup of $S_{48}$, an element like $h$ is literally just a permutation.
But first, let's choose something other than $\{1,\ldots,48\}$ to serve as the set whose permutations we consider. Let's label the faces as Front, Bottom, Up, Down, Right, Left, and denote the 48 faces
To avoid ambiguity, let's further deviate from the standard notation and add commas so that a cycle looks like $(FU,UF)$.
For any term representation of the superflip, we will be able to calculate \begin{align*} h = &(FU, UF)(FR,RF)(FD,DF)(FL,LF)\\ &(UR,RU)(UL,LU)(DR,RD)(DL,LD)\\ & (BU,UB)(BR,RB)(BD,DB)(BL,LB). \end{align*} Note in particular that $h$ is of order two.
To prove that it commutes with every cycle, let's refresh our memories and see how the generators are defined: \begin{align*} R &:=(\text{corner cycles})(RU, RB, RD, RF)(UR,BR,DR,FR)\\ U &:=(\text{corner cycles})(UR,UF,UL,UB)(RU,FU,LU,BU)\\ F &:=(\text{corner cycles})(FU,FR,FD,FL)(UF,RF,DF,LF)\\ L &:=(\text{corner cycles})(LU,LF,LD,LB)(UL,FL,DL,BL)\\ D &:=(\text{corner cycles})(DF,DR,DB,DL)(FD,RD,BD,LD)\\ B &:=(\text{corner cycles})(BU,BL,BD,BR)(UB,LB,DB,RB). \end{align*}
It is now easy to verify that each of the commutators $R^{-1}h^{-1}Rh$ etc. vanish, or, equivalently (and perhaps easier to verify if you know what conjugation does in terms of permutations :-) ), that $h^R := R^{-1}hR = h$ etc. Notice in particular that since $h$ leaves corner faces invariant, the respective corner cycles in the generators don't contribute to the commutator, explaining why I left them out above.
As you correctly stated, if $h$ commutates with all generators, it has to lie in the center.