I'm going through the paper Spectrally robust graph isomorphism by Kolla, Koutis, Madan and Sinop, and am a bit puzzled by the very last paragraph of the second page.
Recall that the Laplacian of a graph $G$ is the matrix $L_G=D-A_G$ where $A_G$ is the adjacency matrix of $G$ and $D$ is the diagonal matrix whose entries are the degrees of the vertices. Suppose $G$ and $H$ have the same vertex set $V$. We say that $G$ dominates $H$ if for all vectors $x\in \mathbb{R}^V$ it holds that $x^tL_Gx\leq x^tL_Hx$.
If I understand correctly, at the end of the second page, the authors claim that it should not be hard to show that if $G$ and $H$ are cospectral and $G$ dominates $H$, then $G$ and $H$ must be isomorphic. How does one show this?
We can identify the eigenvalues and eigenvectors of $L_G$ by the rule:
Of course, the same also holds for $H$. So we can prove that $L_H$ has the same eigenvectors, one at a time:
Once we know that $L_G$ and $L_H$ have the same eigenvectors, we have $L_G \mathbf x = L_H \mathbf x$ for all $\mathbf x$, because we can just write $\mathbf x$ in the basis of eigenvectors. Therefore $L_G = L_H$, and so $G=H$.
This is stronger than just saying $G$ and $H$ are isomorphic; we do not need to permute the vertex set. If we are given that $G,H$ have the same eigenvalues and $G$ dominates $\pi(H)$ for some permutation $\pi$, as in the paper, then we conclude $G = \pi(H)$, so $G$ is isomorphic to $H$.