Let $(E,\mathcal E,\mu)$ be a $\sigma$-finite measure space and $T\in\mathfrak L(\mathcal L^1(\mu))$.
I would like to know which conditions on $T$ would be sufficient to conclude that there is a (possibly signed) transition kernel $\kappa$ on $(E,\mathcal E)$ s.t. $$(Tf)(x)=\int\kappa(x,{\rm d}y)f(y)\;\;\;\text{for all }x\in E\text{ and }f\in\mathcal L^1(\mu).\tag1$$
On page 159 of Analysis of Heat Equations on Domains it is claimed that $$\left\|T\right\|_{\mathfrak L(L^1(\mu),\:L^\infty(\mu))}<\infty\tag2$$ is equivalent to $(1)$ with the additional claim that $\kappa$ has a density with respect to $\mu$, i.e. $$\kappa(x,B)=\int_B\mu({\rm d}y)p(x,y)\;\;\;\text{for all }(x,B)\in E\times\mathcal E\tag3$$ for some $\mathcal E^{\otimes2}$-measurable $p:E^2\to\mathbb R$.
How do we see this? And is there a weaker condition which at least implies the existence of a kernel $\kappa$ (which possibly has no density wrt $\mu$)?
We are looking at different instances of Dunford–Pettis Kernel Representation Theorem (not to be confused with other theorems/properties named after them). The numbering of the statements refers to [1] (see below). In citing the results I am specializing them to the case that all measure spaces are $\sigma$-finite, countably generated, and countably separated. Among other things, these assumptions imply that $L^1$-spaces are separable, that $L^\infty=(L^1)^*$, and that we may regard naturally $L^1$ as a subset of $(L^\infty)^*$. For more general spaces, see [1].
$(S,\mathcal E,\alpha)$ and $(T,\mathcal F,\beta)$ are measure spaces.
Here, for a Banach space $X$ and for $\Gamma\subset X^*$ any closed linear manifold, $\mathfrak L^p_0(S)[X, \Gamma]$ is the space of functions $x_\cdot$ with the following properties (p. 327, B):
The OP is interested in the case $S=T$. The representation of $x_\cdot$ by a kernel is a consequence of the separability of (the range of) $U$, discussed in Thm. 2.2.6. If $U$ is separable, then the kernel is automatically a measurable function on $\mathcal E\otimes \mathcal F$ (i.e. of the form $p$, rather than $\kappa$, in the op).
Operators in $\mathfrak L(L^1(S), L^1(T))$ may not be represented in this way, but a representation theorem for them is also available (Thm. 2.3.9) only in the case $(T,\beta)=(\mathbb R,\lambda)$. The crucial point is that in this case the representation of $U$ involves differentiating the kernel.
Depending on the level of generality for $S$ and $T$, the proofs of the above statements can be quite involved. The idea is essentially to approximate $U$ by operators with finite-dimensional range, for which the kernel representation is not hard to show. In general, this requires some notion of separability (for either $S$, $T$, $U$, in [1] on a case by case basis).
[1] N. Dunford, B.J. Pettis, Linear Operations on Summable Functions, Trans. AMS, 1940