Let us suppose that $\{X_i: i \in I\}$ is a family of nonempty subsets of $X$ such that either $X_i\cap X_j=\emptyset$ or $X_i=X_j$ for all $i,j \in I$.
Fact using the AC: We can define an equivalence relation $\equiv$ on $I$ by saying that $i\equiv j$ if and only if $X_i=X_j$. Denote by $K$ the quotient space of $I$ modulo $\equiv$. Then, for each $k \in K$, we can find equivalence class of $X^\bullet_k$. By the AC, we can choose $X_k$ in the class $X_k^\bullet$, for each $k \in K$. It follows that $\{X_k:k \in K\}$ is made by pairwise disjoint sets and $\cup_k X_k=\cup_i X_i$.
Question: Do we really need the axiom of choice to obtain the existence of the family $\{X_k:k \in K\}$?
I assume that $K$ is the quotient set of $I$ modulo the equivalence relation $\equiv$ defined by $i \equiv j$ iff $X_i = X_j$ and you are trying to construct a family of sets indexed by $K$ that eliminates possible duplication in the $X_i$. Then for $k$ in $K$ you can define $X^{\bullet}_k = \bigcup_{i\in k} X_i$ to define the family of sets you want without using AC.