I'm just starting to learn calculus, but this was the first idea presented: $$0.\overline9=1$$ This would mean that this is true: $$a-0.\overline01=a$$ When I thought about it, then I realised that if the above was true, then this other statement must be considered true: $$((((a-0.\overline01)-0.\overline01)-0.\overline01)...)=(a-0.\overline01)-0.\overline01=a-0.\overline01=a$$ This is confusing because it presents a lot of weird consequences. One such consequence would be a different behavior of open and closed intervals, since numbers that I previously considered to be different, are now considered to be the same. For instance, $2$ is now equal to $1.\overline931415926$.
I can't help but think that I am missing a crucial piece of information.
If you're just beginning to learn calculus, this will certainly seem a bit confusing! The key is to understand that when we write something such as $0.\overline 9$ we mean something very specific.
In this case, we need a precise definition of what "a decimal expansion with an infinite sequence of nines" even means. One way we can do this is to define it as the infinite series such that: $0.\overline9 = \frac{9}{10} + \frac{9}{100} + ...$
If you are familiar with series, you'll notice this is a geometric series. If you are just starting calculus I'll assume you haven't yet met notions of convergence of sequences and series, but it will suffice to simply state that there is a precise notion of these things. In this sense, the geometric series I described above is equal to $1$, by definition of what it means for an infinite series to converge.
However, consider $0.\overline0 1$. How exactly would we define this? It is not obvious to me, and I don't see a good way to do this. In this sense we cannot apply the usual notions of convergence of series because we're not even sure how to express this 'decimal' as such an infinite series!
The key takeaway is that when we make certain claims in mathematics, they mean very specific things, and they refer to specific notions. In this case we first of all need to define what we mean by $0.\overline 9$, (in this case define it as an infinite series), and then we need to define what it means for an infinite series to converge. For completeness, we say that an infinite series converges if and only if the sequence of partial sums converges. (But note there are also different ways to define convergence in different situations).
With this key takeaway in mind, the very idea of $0.\overline0 1$ is not clear, and hence proving further statements from it is not valid. If you can come up with a precise working definition of what you mean by the symbols $0.\overline0 1$, that's a different story! But as presented, there is no way to define it in the same way as $0.\overline 9$