Consider a sequence $\{x_1,...,x_n \}$ such that $b=\max_i |x_i|$ and $d_{\min}=\min_{ij: i \neq j} |x_i-x_j|$. We assume that $b<\infty$ and $d_{\min}>0$.
Can we find a non-trivial lower bound on the smallest eigenvalue of $$G=[ \exp(-(x_i-x_j )^2)]_{i=1..n,j=1..n}$$
We want this lower bound to depend on some property of this sequence.
I was thinking of writing it as \begin{align} u^T G u =\sum_i \sum_j u_i u_j \exp(-(x_i-x_j )^2) \end{align} and showing a lower bound that holds for all $(u_i,u_j)$.
We have the following bounds on each entry $$\exp(-d_{\min}^2) \ge \exp(-(x_i-x_j )^2) \ge \exp(-4 b^2).$$ However, I don't know how to combine these two steps.
Note that we know that $G$ is positive definite. This follows since $\exp(-t^2)$ is a positive definite kernel.
This is a textbook example for applying the Gerschgorin circle theorem: The eigenvalues are located somewhere in the union of discs $D_{r_i}(G_{ii})$ of radius $r_i = \sum_{j\neq i} |G_{ij}|$. Here, we have $G_{ii}=1$ for all $i$ and we can bound the radii as:
$$ r_i = \sum_{j\neq i} |G_{ij}| = \sum_{j\neq i} e^{-(x_i-x_j)^2} \le \sum_{j\neq i} e^{-d_\min^2} = (n-1) e^{-d_\min^2} $$
Thus you have the lower bound $\lambda_\min(G) \ge 1 - (n-1) e^{-d_\min^2}$. Of course this bound is only useful if $d_\min$ is sufficiently large, i.e. if $d_\min > \sqrt{\log(n-1)}$
In the case when the $x$-values are known you can of course improve the bound towards
$$ \lambda_\min(G) \ge 1 - r_\max \qquad r_\max=\max_i \sum_{j=1, j\neq i}^n e^{-{(x_i-x_j)^2}} $$