Suppose I have some vector field $\mathbf{E} = (-ye^{-2t}, xe^{-2t}, 0)$, and vector field $\mathbf{B} = (0,0,e^{-2t})$ that depends on time t. I want to evaluate
$$\int_S \mathbf{B}\cdot d\mathbf{S}$$ and
$$\int_C \mathbf{E}\cdot d\mathbf{x}$$
where $S = x^2 + y^2 < 1$ and $z = 0$, and C is the curve bounding S. Then I want to finally show that
$$\int_C \mathbf{E}\cdot d\mathbf{x} = -\frac{d}{dt} \int_S \mathbf{B}\cdot d\mathbf{S}$$
I am at the first step of showing $\int_S \mathbf{B}\cdot d\mathbf{S}$ to be equal to zero by Gauss's theorem, since $\int_S \mathbf{B}\cdot d\mathbf{S} = \int_v (\nabla \cdot \mathbf{F}) dV = 0$, and for the disc, there is no volume element available. Is this the correct application of the theorem?
For the next step, I am showing that $\int_C \mathbf{E}\cdot d\mathbf{x}$ is effectively $\int_C e^{-2t} dz$.
However, how do I combine all the above information to prove the last step?
First, I recommend you to describe your geometry with cylindrical geometr, problem become much easier. Let's start computing your differential surface $d\mathbf{S}$, and differential contour $d\mathbb{x}$:
$$d\mathbf{S}=(0,0,1)^TdS=(0,0,1)^T \rho d\theta d\rho$$
$$d\mathbf{x}=(-\sin(\theta),\cos(\theta),0)^T\rho d\theta$$
So, $\int_S \mathbf{B}\cdot d\mathbf{S}$ can be rewritten as:
$$\int_S \mathbf{B}\cdot d\mathbf{S} = \int_{0}^{2\pi} \int_{0}^{1} e^{-2t}\rho d\rho d\theta = \pi e^{-2t}$$
While the contour integral becomes (taking into account that $x=\rho \cos(\theta)$ and $y=\rho \sin(\theta)$):
$$\int_C \mathbf{E}\cdot d\mathbf{x} = \int_0^{2\pi} (\sin^2(\theta)+\cos^2(\theta))e^{2t}1d\theta=2\pi e^{-2t}$$
Now, one can easily check that:
$$\frac{d}{dt}\int_S \mathbf{B}\cdot d\mathbf{S} = -2\pi e^{-2t} = -\int_C \mathbf{E}\cdot d\mathbf{x}$$