I'm getting a warning that this is a subjective question, and it very well probably is. But nevertheless, it is still a valid question that helps in the studying of mathematics from my point of view. Visualizing math is very important.
I'm studying abstract algebra, reading about permutations, and I'm having a hard time visualizing the group of permutations.
For instance, a permutation is defined as a function on a set, $f:A\to A$, that is 1-1 and onto.
The binary operation on this set is composition of functions, which is associative, has an identity and has an inverse.
Usually, when I hear of functions, I picture $x^2 + 2x + 1$ or $2x + 2$. Is this what I should be thinking of when I think of a collection of permutations? Because I can't help but confuse my mind by just thinking of all the different ways you can arrange the set. How do y'all picture this set?

You can use matrix-like notation. For example, the bijection
$$f:\{1,2,3\}\to\{1,2,3\}\;,\;\;\begin{cases}f(1)=2\\f(2)=1\\f(3)=3\end{cases}\;\longrightarrow\begin{pmatrix}1&2&3\\2&1&3\end{pmatrix}$$
so you can visualize the action of $\;f\;$ on each element by looking at the different columns above. In some text books that's how permutations are introduced first.