Sine is a function and functions are all written as $f(x)$ where $f$ is the 'name' of the function. We never see any textbook using $f\ x$ to denote a function of $x$.
And also, using $\sin(x)$ saves us from blunders like $\sin x^2$ which can be interpreted as either $\sin(x^2)$ or $\sin(x)^2$. Even writing $\sin(x)^2$ as $\sin^2 x$, is not a very good notation because, $f^2(x)$ generally means $f\circ f(x)$. And $\sin^2 x$ can be interpreted as $\sin(\sin(x))$ which is not equal to $\sin(x)^2$. This contributes to things like $\sin^{-1} x$, which I think doesn't make any sense. I mean, what does $\sin^{-1}x$ supposed to mean? If $\sin^2 x$ is $(\sin x)^2$, then, $$\sin^{-1}x=(\sin x)^{-1}=\frac{1}{\sin x}\qquad\text{or}\qquad\sin^{-1}x=\frac{1}{\sin}(x)$$ $\displaystyle\frac{1}{\sin}(x)$ feels so strange. But $\sin^{-1} x$ is supposed to mean $\arcsin(x)$. Same things happen with all trigonometric functions. Shouldn't $\sin x$ be inaccurate way of denoting $\sin(x)$? Then why many, many books write $\sin(x)$ as $\sin x$? Isn't it plain wrong?
I usually see $\sin x$ being used in most books, but I often prefer $sin(x)$ instead. Most authors will eventually resort to write $sin(f(x))$ with parenthesis whenever they need a $f(x)$ other than $x$ in the argument of $sin$, so I chose to always use parenthesis.
Also, I do enjoy using more $sin^2(x)$ instead of $sin(x)^2$ to denote $sin(x)\cdot sin(x)$. In my experience, the second power of $sin(x)$ is much more common (in the contexts I work/lecture) than $(sin(sin(x))$ so, usually, there's no chance to take one for another.
Also, I've seen $sin^{-1}(x)$ and $sin(x)^{-1}$ to denote $arcsin(x)$, even though $sin(x)^{-1}$ could also be mistaken for $\dfrac{1}{sin(x)}$. I guess it all comes down to define on your text/lecture what notation will be used for each context. That is always the best way to settle things down.
One more thing: if one writes $f^{(2)}(x)$ to denote the second iterate of $f$, it could also be mistaken for the second derivative of $f$ (in the context of Differential Calculus). Some would resort to denote derivatives with Leibniz notation $\dfrac{d^2f}{dx^2}(x)$, but that sometimes demands too much notation for simple things. I conclude that there is no better way to write stuff; just make a convention on your paper/notes/lectures beforehand and stick to it.