Please help me to find some natural example of the meaning of a negative $\times$ negative = positive, except velocity, distance etc in physics.
Simplest example to mind is $$a(t) \times v(t)$$ but I am looking for a something else. Thanks in advanced.

I think you can simplify the question to show that $(-1)\times(-1)=1$ since positive scalar multiplication in physics is always easy to explain in terms of intensity.
So, we just need to think in the real involution $-:\mathbb{R}\to\mathbb{R}$ and then interpreting in any physical context why under the composition it has order $2$. The minus sign almost always mean "backward" (but you have examples of that in velocity and distance) other times this involution means "lose", for example, if you have a fluid, you can put a positive sign if you are gaining fluid volume and put a negative sign if you are losing (regardless the direction of the fluid). Suppose you are losing a lose of some fluid, then you are gaining that amount of fluid. (It works also with gaining or losing energy)
I hope this viewpoint may help you.