When I interpret the inner product and orthogonality of two functions, I consider it the following way. Say you have a basis for a function space $\{\sin(x), \cos(x)\}$ and you have two vectors $u = (2,2)$ and $v = (-1,1)$ representing the functions $2\sin(x)+2\cos(x)$ and $-\sin(x)+\cos(x)$ respectively. These vectors $u$ and $v$ are orthogonal on the function space defined by the basis. Hence the functions they represent are orthogonal on some interval, in this case $[-\pi,\pi]$, why? I dont really know.
But that was just a side question, my main is that is in other texts I have seen when defining the inner product, the functions are being sampled at different points. A function $f(x)$ is sampled at points $t_0, t_1, ... t_n$ and it is represented by a vector $(f(t_0), f(t_1), ... f(t_n))$. And then you can represent another function as the vector $(g(t_0), g(t_1), ... g(t_n))$. And define the inner product of the functions $f$ and $g$ as the dot product between these vectors as
$f(t_o)\cdot g(t_o) + f(t_1)\cdot g(t_1) + ... + f(t_n)\cdot g(t_n)$.
My question is what is the connection between the vectors $u,v$ and the sampled vectors? Both of these pairs of vectors represent the same thing. If the functions are orthogonal then dot product between these pairs are 0. But I still cant see the link between them.
I'll give an example of how the text I have read defines the inner product by sampling....
Consider $p(t) = 2t^2 - t + 1, q(t) = 2t-1$. These functions can be defined on a function space by the basis {$1, t, t^2$}. And this is how my text defines the inner product between these functions, I quote:
"Step 1: You should first sample the polynomials at the values -1, 0, and 1. The samples of each polynomial will give you a vector in $R^3$."
"Step 2: You take the dot product of the two vectors created by sampling. (As a variation, this step could be a weighted inner product)"
I think you are getting bogged down in switching back and forth between different spaces. Orthogonality is all defined in a single space. Looking at an example like yours, if you have a space with two orthonormal vectors $v_1,v_2$, and $(a_1,a_2)$ and $(b_1,b_2)$ are two orthogonal vectors in $\mathbb{R}^2$, then $a_1v_1+a_2v_2$ is orthogonal to $b_1v_1+b_2v_2$. That comes about by expanding the inner product using bilinearity, and canceling out any terms which involve $v_1$ and $v_2$ using their orthogonality. Thus $(a_1v1+a_2v_2,b_1 v_1+b_2v_2)=a_1 b_1 + a_2 b_2 = 0$ by the orthogonality in the plane. But this only works if $v_1,v_2$ are orthogonal and have the same norm.
I don't think I understand your question about sampled functions.