This is a general question about mathematical writing especially for writing research papers and the like.
Question: Do you precede an equation with a comma or colon?
Example A:
- The following equation is the Yosida-Hawking-Penrose-Dantzig function \begin{equation} f(x) = \frac{1}{2} D_\alpha(x,y) \end{equation}
- The following equation is the Yosida-Hawking-Penrose-Dantzig function, \begin{equation} f(x) = \frac{1}{2} D_\alpha(x,y) \end{equation}
- The following equation is the Yosida-Hawking-Penrose-Dantzig function: \begin{equation} f(x) = \frac{1}{2} D_\alpha(x,y) \end{equation}
Example B:
- In fact, we can express the earlier function using a much simpler expression \begin{equation} f(x) = \varphi(x,y) \end{equation} where $\varphi(x,y)$ is the Demiane functional
- In fact, we can express the earlier function using a much simpler expression, \begin{equation} f(x) = \varphi(x,y) \end{equation} where $\varphi(x,y)$ is the Demiane functional
- In fact, we can express the earlier function using a much simpler expression: \begin{equation} f(x) = \varphi(x,y) \end{equation} where $\varphi(x,y)$ is the Demiane functional
Can anyone comment on which one is the best practice?

Generally, I would treat the equation as if it were any ordinary noun phrase, and use the usual rules for comma, colon, or no punctuation.
A colon is used if the equation is an elaboration, or an item. So, just as you might write
you would write
A comma precedes a non-restrictive clause (one that describes rather than identifies the noun phrase), so by analogy with
we might write
In comparison, with a restrictive clause, we use no comma, so just as we would write
we would also write
I suspect there aren't any hard and fast rules for this, however. Whatever you choose to do, be consistent and reasonable.
ETA (2017-09-10): You'll notice that I have no periods at the ends of these equations. The papers I have generally (though not universally) observe this pattern. However, in other fields, equations may have ending punctuation depending on how they occur within a sentence. It may be useful for a writer to consult the publication's style guide, if applicable, or at least examine previous articles within the same publication or outlet.
ETA (2022-05-01): Somewhat coincidentally, on the same day (today), I both (a) received a straggling upvote on this rather middle-aged answer, and (b) found the following in the foreword to the third edition of Ian Stewart's classic book, Galois Theory (2004):