I've read this in a lot of places but never quite got how this is true or meant. Let's say we have a convolution Operator
$$ A_f(g) = \int f(\tau)g(t-\tau)d\tau $$
and apply it to $g(t)=e^{ikt}$. Then we get
$$ A_f(e^{ikt}) = \mathcal F(f) e^{ikt} $$ or $$ A_f(g) = \mathcal F(f) g(t) $$
I recognize that this can be interpreted as: The convolution operator $A_f$ has the eigenfunction $e^{ikt}$ and the eigenvalue $\mathcal F(f)$. But I don't get the jump from here to "FT diagonalizes a convolution". Usually a Matrix can be diagonalized with the eigenvectors, but I don't get how this applies here. I'm a physics student, so keep it human
Diagonalization is synonymous with finding a basis of eigenvectors. If you have a diagonal matrix, the elements of the standard basis are all clearly eigenvectors, and conversely, if you write the matrix in a basis of eigenvectors it will be diagonal. The exponentials form a basis of eigenvectors,so in this sense they diagonalize convolution.
Here follows a silly piece of heuristics that might help make that less precise.
In a sense, when we think of a function $g(t)$ as specified by its values at each $t$, we're putting it in a basis of $\delta$-functions: $$``g=\sum_t g(t)\delta_t".$$ Here $\delta_t$ is a delta-function supported at $t$ ($\delta_t(x)=\delta(t-x)$), and the $\delta_t$s are be regarded as basis vectors. The $g(t)$ are to be regarded as components with respect to this basis. (Since you're a physics student, it might help to say that these basis vectors are like the $|x\rangle$ basis in QM). Evaluating this at $x$, you'd more normally see it written as $$ g(x)=\int g(t)\delta(x-t) dt. $$
An alternative basis from the $\delta$-functions are exponentials: let's write them as $e_k$, where $e_k(x)=e^{2\pi ikx}$ (your convention may differ). The components in this basis are given by the Fourier transform of $g$: $$ ``g=\sum_k\hat{g}(k)e_k" $$ ($|p\rangle$ basis in QM!) or, more normally $$ g(x)=\int \hat{g}(k) e^{2\pi ikx}dk. $$
So, the Fourier transform gives the components in the basis of exponentials, that is the basis of convolution eigenvectors.