(The comments and answers, are no longer relevant to this post other than poestasis's answer, they were caused by misinterpretation)
Using a right triangle with side lengths $(a,b,c)$ where $a , b < c$, I was thinking about how the area of a Pythagorean triple can be found using the Pythagorean triple right before it and I came across something that worked for a large number of Pythagorean triples, $12r^2 + a_{r - 1}b_{r-1} = a_rb_r$, a recursive formula in terms of inradius($r$). This seemingly generates a sequence of Pythagorean triples that I could not find used in any other formula. Its important to note that $12r^2$ is twice the area of Pythagorean triples that stem from side lengths $(3,4,5)$. Using this formula we can find the $1st$ term of sets where the inradius of each Pythagorean triple is $r + r^2k$ ($k$ represents the $k$th term of a sequence) and the relationship between the side lengths are still defined by our recursive formula.
These $1st$ terms are triplets with an even value of $a$ where $r$ increases by $1$:
$(8,15,17),(12,35,37),(16,63,65)...$
Note: We find this using $(8,15,17)$ as we have a recursive formula as well as the knowledge that $r = \frac{a + b - \sqrt{a^2 + b^2}}2$, which lets us find the side lengths of each Pythagorean triple.
Here is a sample of what they generate: $$\begin{array}{c|c|c|c} set_1&15,8,17&33,56,65&51,140,149&69,260,269 \\ \hline set_2&35,12,37&85,132,157&135,352,377&185,672,697 \\ \hline set_3 &63,16,65&161,240,289&259,660,709&357,1276,1325& \\ \hline set_4&99,20,101&261,380,461&423,1064,1145&585,2072,2153 \\ \hline \end{array}$$
I couldn't seem to find any similar formulas to this one or any method of generating Pythagorean triples that follow this sequence, I am looking for a proof.
Generating the Sets
Given the sets in the question, we can match each triple to one generated by the classical formula: $\left(m^2-n^2,2mn,m^2+n^2\right)$ where $(m,n)=1$, $2\not\mid m-n\gt0$: $$ \begin{array}{c|c} \text{set}_0&3,4,5&5,12,13&7,24,25&9,40,41\\\hline m,n&2,1&3,2&4,3&5,4\\\hline\text{set}_1&15,8,17&33,56,65&51,140,149&69,260,269\\\hline m,n&4,1&7,4&10,7&13,10\\\hline \text{set}_2&35,12,37&85,132,157&135,352,377&185,672,697\\\hline m,n&6,1&11,6&16,11&21,16\\\hline \text{set}_3 &63,16,65&161,240,289&259,660,709&357,1276,1325\\\hline m,n&8,1&15,8&22,15&29,22\\\hline \text{set}_4&99,20,101&261,380,461&423,1064,1145&585,2072,2153\\\hline m,n&10,1&19,10&28,19&37,28\\\hline \end{array} $$ Noticing the pattern in the table above, we get that $$ \begin{align} \text{column $j$ of set}_k&=\left(m^2-n^2,2mn,m^2+n^2\right)\\ \text{where }(m,n)&=(1+(2k+1)(j+1),1+(2k+1)j) \end{align} $$ Column $0$ is the leftmost column of the table.
To see that $(m,n)=1$, note that $n(j+1)-mj=1$
To see that $2\not\mid m-n\gt0$, note that $m-n=2k+1$
I have added $\text{set}_0$ to the table, following the pattern in the subsequent sets.
These sets do not cover all of the Pythagorean Triples. For example, $(21,20,29)$ is not covered in any of these sets.
Original Answer: Why $\boldsymbol{ab-12r^2=a'b'}$
This answer, and probably many others, shows the following: all relatively prime Pythagorean triples can be written as $\left\{m^2-n^2,2mn,m^2+n^2\right\}$ where $(m,n)=1,\ 2\nmid m-n\gt0$.
The area of a triangle is the inradius times the semi-perimeter. Since a Pythagorean triangle is a right triangle, the area is half the product of the legs. Thus, the inradius is $$ \begin{align} \text{inradius} &=\frac{\text{area}}{\text{semi-perimeter}}\\ &=\frac{mn\left(m^2-n^2\right)}{m^2+mn}\\[9pt] &=n(m-n) \end{align} $$ Suppose that $\{a,b,c\}=\left\{m^2-n^2,2mn,m^2+n^2\right\}$ is a Pythagorean triple. Then $$ \begin{align} \overbrace{2mn\left(m^2-n^2\right)}^{\large ab}-12\overbrace{n^2(m-n)^2}^{\large r^2} &=2m(m+n)n(m-n)-12n(m-n)n(m-n)\\ &=2n(m-n)(m(m+n)-6n(m-n))\\ &=2n(m-n)\left(m^2-5mn+6n^2\right)\\ &=2n(m-n)(m-2n)(m-3n)\\ &=\underbrace{2n(m-2n)\vphantom{\left(n^2\right)}}_{\large e}\underbrace{\left((m-2n)^2-n^2\right)}_{\large d} \end{align} $$ where $\{d,e,f\}=\left\{(m-2n)^2-n^2,2n(m-2n),(m-2n)^2+n^2\right\}$ is another Pythagorean triple.
In fact: $$ \begin{bmatrix}d\\e\\f\end{bmatrix} =\begin{bmatrix} -1&-2&2\\ 2&1&-2\\ -2&-2&3 \end{bmatrix} \begin{bmatrix}a\\b\\c\end{bmatrix} $$ and, inversely, $$ \begin{bmatrix} -1&2&2\\ -2&1&2\\ -2&2&3 \end{bmatrix} \begin{bmatrix}d\\e\\f\end{bmatrix} =\begin{bmatrix}a\\b\\c\end{bmatrix} $$ Note that $d,e,f$ have the same parity as $a,b,c$, respectively.
Because $$ \begin{bmatrix} -1&-2&2\\ 2&1&-2\\ -2&-2&3 \end{bmatrix}^T \begin{bmatrix} 1&0&0\\ 0&1&0\\ 0&0&-1 \end{bmatrix} \begin{bmatrix} -1&-2&2\\ 2&1&-2\\ -2&-2&3 \end{bmatrix} =\begin{bmatrix} 1&0&0\\ 0&1&0\\ 0&0&-1 \end{bmatrix} $$ we have $d^2+e^2-f^2=a^2+b^2-c^2$.
Furthermore, as mentioned above, $$ \begin{align} \text{inradius} &=\frac{\text{area}}{\text{semi-perimeter}}\\[6pt] &=\frac{ab}{a+b+\sqrt{a^2+b^2}}\\ &=\frac{a+b-\sqrt{a^2+b^2}}2 \end{align} $$