If I have a polynomial trajectory
$$y(t)=at^2+bt$$
The idea I would like to express is that by fixing $a$ and $b$, I will get a unique trajectory $y(t)$. Can I say that there exists a map $M$ such that the trajectory $y(t)$ is $$y(t) = M(a,b)?$$ If not, how can I express the idea in proper math terms?
Depending on what you are doing with these polynomials, there are a number of ways that you could think about them. Depending on how you think about them, you might adopt different notation. A non-exhaustive list of possibilities follows:
Yet another possibility (which might arise in, for example, optimization problems) is to consider a function of three variables, i.e. $$ M : \mathbb{R}^2 \times [0,\infty) \to \mathbb{R} : (a,b,t) \mapsto at^2 + bt. $$ I have chosen to assume that $t$ is nonnegative, as we often work in settings where $t = \text{time}$ is assumed to be nonnegative. This assumption is totally arbitrary, but makes sense from the point of view that $a$ and $b$ are some kind of initial condition (e.g. $a$ might be half of an initial acceleration, and $b$ might be an initial velocity).
Given that your stated goal has something to do with observing changes in the function as the parameters are perturbed, this last notation might be the most reasonable. It allows you to easily discuss, for example, partial derivatives with resect to the parameters $a$ and $b$, while keeping $t$ fixed.