If one is asked to verify that the canonical orientation on the $2$-sphere $S^2$ is twisted by the antipodal map, is it right to say that this is so simply because the Jacobian matrix of the map $A\colon\mathbb{R}^3\to\mathbb{R}^3$ defined by
$$(x,y,z)\mapsto (-x,-y,-z)$$
has determinant $-1$?
Actually, it's not that simple. Consider a similar example: Let $M$ be the $xy$-plane in $\mathbb R^3$ -- that is, $M$ is the set of all points of the form $(x,y,0)$ for $(x,y)\in \mathbb R^2$. Even though the antipodal map of $\mathbb R^3$ has Jacobian determinant $-1$ as you noted, and it takes $M$ to itself, in turns out that its restriction to $M$ is actually orientation-preserving.
The thing about $S^2$ that's different is that the antipodal map also takes the outward unit normal $N$ of $S^2$ to itself. The area form $\omega$ of $S^2$ is given by $$ \omega = i_N (dx\wedge dy\wedge dz)|_{TS^2}, $$ where $i_N$ represents interior multiplication by $N$. It follows that \begin{align*} (A|_{S^2})^*\omega &= i_{A^{-1}_*N} A^*(dx\wedge dy\wedge dz)|_{TS^2}\\ &= i_N ( -dx\wedge dy\wedge dz)|_{TS^2}\\ &= -\omega. \end{align*}
(The reason this calculation doesn't apply to the $xy$-plane is that $A$ reverses the direction of its normal.)