The best softwares to understand the intersections of the 3D objects in the Euclidean space

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What is the best software (Easy to follow and clear graphics) to draw the intersections between two spheres, Two spheres and a pyramid, for example.

The centre and the radius of the spheres are given in Euclidean coordinates.

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Winplot is a very acessible and user-friendly. You can download it for free here: http://math.exeter.edu/rparris/winplot.html