I came across this as I was learning unscented Kalman filters.
Suppose I have a symmetric and positive definite matrix $P$. I want to take its square root. After I perform the Cholesky decomposition of $P$, I get $LL^T$. One of the resources (inaccessible on the web) I am using says that when you take the square root of $LL^T$, you get the lower triangular matrix $L$. That's why I don't understand.
My understanding was that matrix $Y$ is a square root of $X$ if the matrix product $YY$ is equal to $X$. But what seems to be acceptable is that matrix Y can be a square root of X even when the matrix product $Y^TY$ is equal to $X$.
The source you are quoting may be found in -- https://www.hindawi.com/journals/ijno/2011/416828/ equation 18 and the wording right after it.
Same thing from the wikipedia page, https://en.wikipedia.org/wiki/Cholesky_decomposition#Kalman_filters which effectively says the same thing.
The closest answer I've found is from -- http://ais.informatik.uni-freiburg.de/teaching/ws12/mapping/pdf/slam05-ukf.pdf page 14.
It states that Cholesky Matrix Square Root is Alternative definition of the matrix square root.
Edit:
so, if you go by the alternative definition (from page 14 of the pdf file) that $L$ is the square root of $P$ when $P = LL^T$ instead of the normal (or scalar way) matrix square root definition of $P=LL$. It comes naturally that when you take the square root of $LL^T$ you get the lower triangular matrix $L$.