One thing that bothers me about mappings is that they seem to instantaneously transport points from one space to another. I feel like there should be a space of unique, non-intersecting paths that each of the points travel on to get to their new destination. Does anyone agree?
For example consider a mapping $F:\Bbb R^2 \to \Bbb R^2$ with $F(x,y)=(e^x,e^y).$ Consider the function $g(x)=\frac{1}{x}$ embedded in the standard $x-y$ cartesian system. We start with $g$ and magically get $h(x)=e^{\frac{1}{\log(x)}}$ with no information about how $g$ was deformed into $h!$ Maybe it's just perspective but I feel like at every point in time we should be able to track the deformations as $g$ morphs into $h.$
I drew a picture with the paths that I think each of the points should follow as they start with $g$ and move to become $h.$
The upper bound path is $y=e^x$ and the lower bound path is $y=\log(x).$ The central path is $y=x.$
Obviously there's not enough rigor here, but I tried my best with what I know. My question is:
Is there a rigorous way to describe $g$ continuously deforming into $h$ and could it be useful?

It sounds like you're looking for the notion of homotopy.
Broadly speaking, the idea behind homotopy is that we're not just interested in individual continuous maps into a space $X$, but rather the manipulation of such maps. E.g. the picture you drew suggests that we should be able to take the map $$\alpha:\mathbb{R}\rightarrow\mathbb{R}: x\mapsto e^x$$ and "deform" it into the map $$\beta:\mathbb{R}\rightarrow\mathbb{R}: x\mapsto \ln(x),$$ for example hitting the map $\gamma:\mathbb{R}\rightarrow\mathbb{R}:x\mapsto x$ along the way.
The trick to making this intuition precise is to think about maps from a product space. Specifically, we're going to think of "a continuous map from $A$ to $B$ being deformed over time from $t=0$ to $t=1$" (say) as "a map from $A\times [0,1]$ to $B$." Conversely, given a continuous map $m:A\times [0,1]\rightarrow B$, for each $t\in[0,1]$ we get the "snapshot map" $m_t:A\rightarrow B: a\mapsto m(a,t)$, and we think of $m_0$ and $m_1$ as the "starting" and "finishing" maps.
We can then, for example, talk about when one continuous map $f:A\rightarrow B$ can be "deformed into" another continuous map $g:A\rightarrow B$ - namely, when there is a continuous map $m:A\times[0,1]\rightarrow B$ such that $m_0=f$ and $m_1=g$. When such an $m$ exists we say that $f$ and $g$ are homotopic.
And there's a lot more to say. Of particular interest is the case when $A$ itself is the unit interval $[0,1]$ and we restrict attention to those homotopies $m:[0,1]\times[0,1]\rightarrow B$ which "keep the endpoints fixed," that is, which satisfy $m(0,0)=m(0,x)$ and $m(1,0)=m(1,x)$ for all $x\in[0,1]$ - these $m$s are the path homotopies and lead to the notion of the fundamental group(oid). The notion of homotopy also leads to a notion of similarity of spaces, namely homotopy equivalence. The wiki page has more information on the topic.